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This function generates a heatmap that visualises the similarity between shared groups across batches, as computed by getIDEr.

Usage

plotHeatmap(seu, ider, batch.var = "Batch")

Arguments

seu

A Seurat object.

ider

The output list from the getIDEr function.

batch.var

Character string specifying the metadata column that contains batch information. Default is "Batch".

Value

A heatmap displaying the similarity between shared groups across batches.

See also